#470: Python in Medicine and Patient Care

Do you have text that you want to process automatically? Maybe you want to pull out key products or topics of conversation? Maybe you want to get the sentiment? The possibilities are many with this week's topic: NLP with spaCy and Python. Our guest, Vincent D. Warmerdam, has worked on spaCy and other tools at Explosion AI and he's here to give us his tips and tricks for working with text from Python. Episode sponsors Posit Talk Python Courses Links from the show Course: Getting Started with NLP and spaCy: talkpython.fm Vincent on X: @fishnets88 Vincent on Mastodon: @koaning Programmable Keyboards on CalmCode: youtube.com Sample Space Podcast: youtube.com spaCy: spacy.io Course: Build An Audio AI App: talkpython.fm Lemma example: github.com Code for spaCy course: github.com Python Bytes transcripts: github.com scikit-lego: github.com Projects that import "this": calmcode.io Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

A couple of weeks ago, Charlie Marsh and the folks at Astral made another big splash with a major release of uv called "uv: Unified Python packaging" which has many far reaching features. We had to have Charlie on the show to give us the inside look into this development. Let's get to it. Episode sponsors Posit Talk Python Courses Links from the show Charlie Marsh on Twitter: @charliermarsh Charlie Marsh on Mastodon: @charliermarsh Episode follow up: Wrote up how we use uv at Talk Python: mkennedy.codes uv: Unified Python packaging: astral.sh Python executable management: astral.sh Projects: astral.sh Tools: astral.sh Scripts: astral.sh Rye and uv: August is Harvest Season for Python Packaging: lucumr.pocoo.org Python Build Standalone releases: github.com Rules: astral.sh Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

Every year the core developers meet to discuss and propose the major changes and trends in Python itself. This invite-only conference of about 50 people happens inside PyCon in the US. Because it's private, we rarely get detailed looks inside this event. On this episode, we have Seth Michael Larson here to give us his account of the sessions and proposals. It's a unique look into the zeitgeist of CPython. Episode sponsors Posit Talk Python Courses Links from the show Seth on Mastodon: @[email protected] Seth on Twitter: @sethmlarson Seth on Github: github.com The Python Language Summit 2024: blogspot.com PEP 2026: Calendar versioning for Python: github.com PSF authorized as a CVE Numbering Authority: python.org Recommends Memory-Safe Programming Languages: blogspot.com Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

Python performance has come a long way in recent times. And it's often the data scientists, with their computational algorithms and large quantities of data, who care the most about this form of performance. It's great to have Stan Seibert back on the show to talk about Python's performance for data scientists. We cover a wide range of tools and techniques that will be valuable for many Python developers and data scientists. Episode sponsors Posit Talk Python Courses Links from the show Stan on Twitter: @seibert Anaconda: anaconda.com High Performance Python with Numba training: learning.anaconda.cloud PEP 0703: peps.python.org Python 3.13 gets a JIT: tonybaloney.github.io Numba: numba.pydata.org LanceDB: lancedb.com Profiling tips: docs.python.org Memray: github.com Fil: a Python memory profiler for data scientists and scientists: pythonspeed.com Rust: rust-lang.org Granian Server: github.com PIXIE at SciPy 2024: github.com Free threading Progress: py-free-threading.github.io Free Threading Compatibility: py-free-threading.github.io caniuse.com: caniuse.com SPy, presented at PyCon 2024: us.pycon.org Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

Do you feel like ADHD is holding you back? Maybe you don't personally have ADHD but you work with folks who do and you'd like to support them better. Either way, how ADHD interplays with programming and programmers is pretty fascinating. On this episode we have Chris Ferdinandi who himself has ADHD and has written a lot about it to share his journey and his advice for thriving with ADHD as a programmer or data scientist. Episode sponsors Posit Talk Python Courses Links from the show Chris on Mastodon: @cferdinandi ADHD FTW Talk Python Page: adhdftw.com Building a Second Brain: buildingasecondbrain.com Building a Second Brain Book: buildingasecondbrain.com White Collar Jobs are Just Meetings: theatlantic.com Article with Fighting Duck-Sized Horses Agile: mensurdurakovic.com Nothing Phone: nothing.tech Apple Watch: apple.com Todoist: todoist.com Anytype (open source Notion): anytype.io Obsidian: obsidian.md Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

Flask is one of the most important Python web frameworks and powers a bunch of the internet. David Lord, Flask's lead maintainer is here to give us an update on the state of Flask and Pallets in 2024. If you care about where Flask is and where it's going, you'll definitely want to listen in. Episode sponsors Sentry Error Monitoring, Code TALKPYTHON Talk Python Courses Links from the show David on Mastodon: @davidism David on X: @davidism State of Pallets 2024 FlaskCon Talk: youtube.com FlaskCon: flaskcon.com FlaskCon 2024 Talks: youtube.com Pallets Discord: discord.com Pallets Eco: github.com JazzBand: jazzband.co Pallets Github Org: github.com Jinja: github.com Click: github.com Werkzeug: github.com MarkupSafe: github.com ItsDangerous: github.com Quart: github.com pypistats: pypistats.org Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

If you want to get better at something, often times the path is pretty clear. If you get better at swimming, you go to the pool and practice your strokes and put in time doing the laps. If you want to get better at mountain biking, hit the trails and work on drills focusing on different aspects of riding. You can do the same for programming. Reuven Lerner is back on the podcast to talk about his book Pandas Workout. We dive into strategies for learning Pandas and Python as well as some of his workout exercises. Episode sponsors Sentry Error Monitoring, Code TALKPYTHON Scalable Path Talk Python Courses Links from the show Reuven Lerner on Twitter: @reuvenmlerner Pandas Workout Book: manning.com Bamboo Weekly: Solar eclipse: bambooweekly.com Bamboo Weekly: Avocado hand: bambooweekly.com Scaling data science across Python and R: talkpython.fm Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

Python is special. It's used by the big tech companies but also by those you would rarely classify as developers. On this episode, we get a look inside how Python is being used at a Children's Hospital to speed and improve patient care. We have Dr. Somak Roy here to share how he's using Python in his day to day job to help kids get well a little bit faster. Episode sponsors Sentry Error Monitoring, Code TALKPYTHON Posit Talk Python Courses Links from the show Somak Roy: linkedin.com Cincinnati Children's Hospital: cincinnatichildrens.org CNVkit: Genome-wide copy number: readthedocs.io cnaplotr: github.com hgvs: readthedocs.io openpyxl: readthedocs.io Hera is an Argo Python SDK: github.com insiM: in silico Mutator software for bioinformatics: github.com Bamsurgeon: github.com pysam - An interface for reading and writing SAM files: readthedocs.io Scientists rename human genes to stop Microsoft Excel from misreading them as dates: theverge.com BioPython: biopython.org Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

Python is one of the most popular languages of the current era. It dominates data science, it an incredible choice for web development, and its many people's first language. But it's not super great on front-end programing, is it? Frameworks like React, Vue and other JavaScript frameworks rule the browser and few other languages even get a chance to play there. But with pyscript, which I've covered several times on this show, we have the possibility of Python on the front end. Yet it's not really a front end framework, just a runtime in the browser. That's why I'm excited to have Ken Kinder on the podcast to talk about his project PuePy, a reactive frontend framework in Python. Episode sponsors Sentry Error Monitoring, Code TALKPYTHON Code Comments Talk Python Courses Links from the show Michael's Code in a Castle Course: talkpython.fm/castle Ken Kinder: @[email protected] PuePy: puepy.dev PuePy Docs: docs.puepy.dev PuePy on Github: github.com pyscript: pyscript.net VueJS: vuejs.org Hello World example: docs.puepy.dev Tutorial: docs.puepy.dev Tutorial running at pyscript.com: pyscript.com Micropython: micropython.org Pyodide: pyodide.org PgQueuer: github.com Writerside: jetbrains.com Michael's PWA pyscript app: github.com Michael's demo of a PWA pyscript app: youtube.com Python iOS Web App with pyscript and offline PWAs video: youtube.com Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy

I've gathered a group of Python experts who have been thinking deeply about where Python is going and who have lived through where it has been. This episode is all about near-term Python trends and things we each believe will be important to focus on as Python continues to grow. Our panelists are Jodie Burchell, Carol Willing, and Paul Everett. Episode sponsors Code Comments Posit Talk Python Courses Links from the show Shiny course at Talk Python: talkpython.fm/shiny Jodie Burchell: @t_redactyl Carol on Mastodon: @[email protected] Paul Everitt: @paulweveritt Watch this episode on YouTube: youtube.com Episode transcripts: talkpython.fm --- Stay in touch with us --- Subscribe to us on YouTube: youtube.com Follow Talk Python on Mastodon: talkpython Follow Michael on Mastodon: mkennedy